Package: foodingraph 0.1.0

foodingraph: Food Network Inference and Visualization

Displays a weighted undirected food graph from an adjacency matrix. Can perform confidence-interval bootstrap inference with mutual information or maximal information coefficient. Based on my Master 1 internship at the Bordeaux Population Health center. References : Reshef et al. (2011) <doi:10.1126/science.1205438>, Meyer et al. (2008) <doi:10.1186/1471-2105-9-461>, Liu et al. (2016) <doi:10.1371/journal.pone.0158247>.

Authors:Victor Gasque [cre, aut], Boris Hejblum [aut], Cecilia Samieri [aut]

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Peer review:

Bug tracker:https://github.com/vgasque/foodingraph/issues

On CRAN:

9 exports 4 stars 1.02 score 55 dependencies 3 scripts 175 downloads

Last updated 5 years agofrom:b920b3e245. Checks:OK: 1 NOTE: 6. Indexed: yes.

Exports:boot_cat_binboot_simulated_cat_bincompare_graphsfamily_palettegraph_from_links_nodesgraph_from_matrixlinks_nodes_from_matmic_adj_matrixsave_graph

Dependencies:cachemclicolorspacecowplotcpp11dplyrfansifarverfastmapgenericsggforceggplot2ggraphggrepelgluegraphlayoutsgridExtragtableigraphisobandlabelinglatticelifecyclemagrittrMASSMatrixmemoisemgcvminervamunsellnlmepillarpkgconfigpolyclippurrrR6RColorBrewerRcppRcppArmadilloRcppEigenrlangscalesstringistringrsystemfontstibbletidygraphtidyrtidyselecttweenrutf8vctrsviridisviridisLitewithr